BITS Meetings' Virtual Library:
Abstracts from Italian Bioinformatics Meetings from 1999 to 2013


766 abstracts overall from 11 distinct proceedings





Display Abstracts | Brief :: Order by Meeting | First Author Name
1. Aluffi-Pentini F, De Fonzo V, Parisi V
A new algorithm for solving differential equations
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

2. Arisi I, Rosato V, Cattaneo A
Direct and reverse simulations of signal transduction pathways in PC12 cell
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

3. Ballario P, Pedicini M
An agent based model for the light signal transduction in Neurospora crassa
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

4. Bartocci E, Moeller S, Toldo L, Merelli E
Integration of EnsEMBL with BioAgent
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

5. Beni L, Trerotola M, Antolini L, Alberti S
A protein-DNA recognition code for a-helical transcription factors
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

6. Berg B, La Penna G, Minicozzi V, Morante S, Rossi G
Multicanonical methods for protein folding
Meeting: BIOCOMP 2003 - Year: 2003
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Topic:

Abstract: Missing

7. Blasi MF, Bignami M, Giuliani A, Casorelli I
A new approach to identify genetic networks using microarrays data
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

8. Boccia A, Petrillo M, Di Bernardo D, Banfi S, Guffanti A, Pesole G, Paolella G
A tool for storage, automated annotation and analysis of Conserved Sequence Tags (CSTs)
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

9. Brannetti B, Helmer-Citterich M
Comparison of different tools for the prediction of protein interaction specificity
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

10. Bultrini E, Pizzi E, Del Giudice P, Frontali C
Symmetry properties of pentamer usage in non-coding DNA
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

11. Ceroni A, Vullo A, Frasconi P
A Combination of Support Vector Machines and Bidirectional Recurrent Neural Networks for Protein Secondary Structure Prediction
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

12. Cestaro A, Tosatto SCE, Fogolari F, Toppo S, Valle G
CASPITA @ CASP5
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

13. Chillemi G, Bruselles A, Desideri A
Comparative MD simulations of wild type and T718A mutant in the DNA-human topoisomerase I complex
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

14. Chiusano ML
Protein Structure and genomic composition
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

15. Chiusano ML, Potenza N, Del Gaudio R, Russo GMR, Di Giaimo R, Mondola T, Geraci G
Structure organization of the innnexin family: integration of computational methods and molecular data
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

16. Ciarapica R, Rosati J, Cesareni G, Nasi S
Molecular recognition in helix-loop-helix and helix-loop-helix-leucine zipper domains: Design of repertoires and selection of high affinity ligands for natural proteins
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

17. Ciccarelli FD, Von Mering C, Bork P
Inferring Novel Functional Links between Different Metabolic Pathways from Genomic Associations
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

18. Corà D, Provero P, Caselle M
Finding regulatory elements in eucaryotes: a statistical approach using Gene Ontology
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

19. Costantini S, Colonna G, Facchiano AM
Coeliac disease: studying the interaction of HLA-DQ2 molecule with gluten peptides by computational methods
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

20. Davassi A, Petrillo M, Paolella G
Sequence analysis with CAPRI, a web-desktop application
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

21. D'Elia D, Leo P, Scioscia G, Lopriore P, Delle Foglie G, Licciulli F, Millot M, Weighardt F, Bonfini L, Lorberth R, Heinze P, Van den Eede G, Attimonelli M, Buhk H-J
The GMOs Molecular Register: an Integrated Bioinformatic System to support detection/quantification of GMOs
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Databases: ontologies and integration

Abstract: Missing

22. Di Bernardo D, Gardner TS, Lorenz D, Collins JJ
Reverse Engineering Genetic Networks: a computational and experimental approach
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

23. D'Ursi P, Rovida E, Arosio P, Zanella I
In silico human genome search and classification of H-ferritin-like genes
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

24. The ELM Consortium
Eukaryotic linear motifs in the ELM web tool
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Databases: ontologies and integration

Abstract: Missing

25. Emerson A, Liuni S, Castrignanò T, Rossi E
Plan for a National Infrastructure in Bioinformatics
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

26. Facchiano AM, Facchiano A, Facchiano F
Active Sequences Collection (ASC) and a new strategy to identify protein functions
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

27. Falconi M, Desideri A
Understanding experimental properties of Cu,Zn SODs through molecular dynamics simulation
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

28. Ferraro L, Rosato V, Giuliano G
A probabilistic analysis of peptide distribution in proteomes
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

29. Ferrè F, Ausiello G, Zanzoni A, Helmer-Citterich M
SURFACE a web server for annotation of protein functional sites
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

30. Fogolari F, Berrera M, Molinari H
Amino acid empirical contact energy definitions for fold recognition in the space of contact maps
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

31. Fogolari F, Tosatto SCE, Cestaro A, Valle G, Molinari H
Native loop conformation recognition by MM/PBSA energy calculation
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

32. Fontana P, Segala C, Toppo S, Moser C, Grando S, Valle G, Velasco R
Bioinformatics within the IASMA grape project: tools for data mining and sequences annotation
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

33. Giuliani A, Benigni R, Colafranceschi M, Chandrashekar I, Cowsik SM
Large contact surface interactions between proteins detected by time series analysis methods: a case study on C- phycocyanins
Meeting: BIOCOMP 2003 - Year: 2003
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Topic:

Abstract: Missing

34. Grillo G, Licciulli F, Liuni S, Sbisà E, Pesole G
PatSearch: a program for the detection of patterns and structural motifs in nucleotide sequences
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

35. Guffanti A, Lassandro L, Finocchiaro G, Muller H
The Human - Mouse Promoter Machine at IFOM: a tool for retrieval of orthologous promoter sequences from genome sequence data
Meeting: BIOCOMP 2003 - Year: 2003
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Topic:

Abstract: Missing

36. Horner DS, Pesole G
The estimation of relative site variability among aligned homologous protein sequences
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

37. Iacono M, Mignone F, Pesole G
Genome-wide analysis of the sequence region sorrounding the transcription start site of human mRNAs
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

38. Lanave C, Santamaria M, Saccone C
Evolution of gene family in eukaryotes: the BCL-2 gene family
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

39. Lanzarato F, Iazzetti G, Caserta E, Botta M, Franceschinis G, Calogero RA
RRE & ClAW: two new java tools for microarray data mining
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

40. Lexa M, Zara I, Valle G
PRIMEX 1.0 and VPCR 2.0: Processing genomic sequence data for efficient and accurate simulation of PCR reactions with genomic DNA as template
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

41. Martelli PL, Fariselli P, Casadio R
An ENSEMBLE machine learning approach for the prediction of all-alpha membrane proteins
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

42. Medico E, D'Alessandro L, Gentile A
Handling global expression data from multiple microarray platforms
Meeting: BIOCOMP 2003 - Year: 2003
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Topic:

Abstract: Missing

43. Montecchi-Palazzi L, Cabibbo A, Zanzoni A, Helmer-Citterich M, Cesareni G
MINT a Molecular INTeraction database
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Databases: ontologies and integration

Abstract: Missing

44. Mucci A, Cusmano A, De Francisci M, Manniello MA, Marra D, Romano P, Mauri G
Integration of data from different sources: a prototype devoted to p53 mutations
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Databases: ontologies and integration

Abstract: Missing

45. Panteri R, Paiardini A, Marino R, Pascarella S, D'Arcangelo G, Keller F
Reelin is a heparin binding protein: in vitro testing and in silico analysis
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

46. Papaleo E, Santarossa G, Vai M, Fantucci P, De Gioia L
Structural model for Gas1p family members by combined threading and secondary structure prediction methods
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

47. Pavesi G, Mauri G, Pesole G
An Algorithm for Finding Common Secondary Structure Motifs in a Set of Unaligned RNA Sequences
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

48. Pizzi E, Bultrini E, Del Giudice P, Frontali C
Computational analysis of non-coding regions in eukaryotic genomes
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Comparative genomics and molecular evolution

Abstract: Missing

49. Pugliese L
Annotation of EST sequences by a structural bioinformatics approach
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

50. Romani A, Trerotola M, Guerra E, Emerson A, Rossi E, Bronowska A, Alberti S
Detection and analysis of spliced chimeric mRNAs in sequence databanks
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing

51. Saviozzi S, Lo Iacono M, Lanzarato F, Franceschini G, La Mantia G, Calabrò V, Calogero RA
Analysis of p63 isoform-driven gene expression: a cDNA array/bioinformatics integrated approach
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

52. Specchio R, Caprera A, Hatton J, Milanesi L
GeneGrid: a workflow system for sequences analysis
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Databases: ontologies and integration

Abstract: Missing

53. Temussi PA
The Mechanism of Interaction of Sweet Proteins with their Receptor: Modelling the Complexes
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Others

Abstract: Missing

54. Via A, Helmer-Citterich M
A structural study for the optimization of functional motifs encoded in protein sequences
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

55. Vitulo N, Cestaro A, Vezzi A, D'Angelo M, Simonato F, Malacrida G, Campanaro S, Valle G
Annotation of Photobacterium profundum genome
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Databases: ontologies and integration

Abstract: Missing

56. Vullo A, Frasconi P
Disulfide Connectivity Prediction using Generalized Recursive Neural Networks and Evolutionary Information
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Structural genomics

Abstract: Missing

57. Zara I, Schiavon R, Valle G
Development of new bioinformatic tools to analyze the HLA genetic system
Meeting: BIOCOMP 2003 - Year: 2003
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Topic: Novel algorithms

Abstract: Missing



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